#include <SpinePlugin/include/ImFusion/Spine/AnatomicalStructuresCollider.h>

Helper class for visualizing overlaps of AnatomicalStructures in a Spine. More...

Inheritance diagram for AnatomicalStructuresCollider:

Detailed Description

Helper class for visualizing overlaps of AnatomicalStructures in a Spine.

Will automatically compute the pairwise overlap of structures whenever one has moved and visualize it in the provided views, for as long as this object exists. Can be used in a fast voxel based mode that does not match the meshes exactly, or a slower direct mesh intersection mode. To directly obtain just the overlap meshes for a given pair of structures using the fast mode, use the predictionBasedIntersection member function. For testing purposes, this object can be created in the Suite using the AnatomicalStructuresColliderAlgorithm below.

Public Member Functions
	AnatomicalStructuresCollider (const SpineData &input, const std::vector< InteractiveView * > &viewsToShowIn)

Public Member Functions inherited from Configurable
virtual void	configure (const Properties *p)
	Configure this object instance by de-serializing the given Properties.

virtual void	configuration (Properties *p) const
	Serialize the current object configuration into the given Properties object.

virtual void	configureDefaults ()
	Retrieve the properties of this object, replaces values with their defaults and sets it again.

void	registerParameter (ParameterBase *param)
	Register the given Parameter or SubProperty, so that it will be configured during configure()/configuration().

void	unregisterParameter (const ParameterBase *param)
	Remove the given Parameter or SubProperty from the list of registered parameters.

	Configurable (const Configurable &rhs)

	Configurable (Configurable &&rhs) noexcept

Configurable &	operator= (const Configurable &)

Configurable &	operator= (Configurable &&) noexcept

Public Member Functions inherited from SignalReceiver
	SignalReceiver ()=default
	Default constructor.

	SignalReceiver (const SignalReceiver &other)
	Copy constructor, does not copy any existing signal connections from other.

SignalReceiver &	operator= (SignalReceiver rhs)
	Assignment operator, disconnects all existing connections, does not copy any existing signal connections from rhs.

virtual	~SignalReceiver ()
	Virtual destructor disconnects from all connected signals.

Static Public Member Functions
static bool	couldPotentiallyCollide (const AnatomicalStructure &structure1, const AnatomicalStructure &structure2)
	Increases sampling rate of segmentation maps, requires voxel based mode.

static std::unique_ptr< Mesh >	predictionBasedIntersection (const AnatomicalStructure &structure1, const AnatomicalStructure &structure, int upsamplingFactor, std::unique_ptr< GL::ImageProgram > &shaderProgram)
	Intersection computation using the ML prediction volumes.

static const SharedImage *	predictionVolume (const AnatomicalStructure &structure)
	Returns the ML prediction volume created during segmentation or nullptr if none has been stored.

Public Attributes
Parameter< bool >	p_collideProbabilityMaps

Parameter< int >	p_upsamplingFactor
	If enabled the segmentation map overlap is meshed instead of doing a mesh-mesh intersection.

Public Attributes inherited from Configurable
Signal	signalParametersChanged
	Emitted whenever one of the registered Parameters' or SubPropertys' `signalValueChanged` signal was emitted.

Additional Inherited Members
Protected Member Functions inherited from SignalReceiver
void	disconnectAll ()
	Disconnects all existing connections.

Protected Attributes inherited from Configurable
std::vector< Param >	m_params
	List of all registered Parameter and SubProperty instances.

Member Function Documentation

◆ couldPotentiallyCollide()

static bool couldPotentiallyCollide	(	const AnatomicalStructure &	structure1,
		const AnatomicalStructure &	structure2 )

static

Increases sampling rate of segmentation maps, requires voxel based mode.

Quick preliminary check using bounding box

◆ predictionBasedIntersection()

static std::unique_ptr< Mesh > predictionBasedIntersection	(	const AnatomicalStructure &	structure1,
		const AnatomicalStructure &	structure,
		int	upsamplingFactor,
		std::unique_ptr< GL::ImageProgram > &	shaderProgram )

static

Intersection computation using the ML prediction volumes.

Both inputs need to have a prediction volume stored, use predictionVolume member function to check. Upsampling factor increases the resolution during computation mode, increasing accuracy at cost of performance. shaderProgram allows recycling an OpenGL shader to avoid the performance hit from creating it each time. If the unique_ptr is empty, a new shader will be created and kept there for usage in later invocations. Returns nullptr on failure.

Member Data Documentation

◆ p_collideProbabilityMaps

Parameter<bool> p_collideProbabilityMaps

Initial value:

= {
            "collideProbabilityMaps",
            true,
            *this}

◆ p_upsamplingFactor

Parameter<int> p_upsamplingFactor

Initial value:

= {"upsamplingFactor",
                                             1,
                                             *this}

If enabled the segmentation map overlap is meshed instead of doing a mesh-mesh intersection.

The documentation for this class was generated from the following file:

SpinePlugin/include/ImFusion/Spine/AnatomicalStructuresCollider.h

Detailed Description

Public Member Functions

Static Public Member Functions